Shotgun sequencing:
- Provides species-level identification (C. albicans vs. C. glabrata)
- Shows relative abundance within the microbial community up to 0.005% sensitivity
- Can reveal accompanying dysbiosis patterns
qPCR:
- Higher analytical sensitivity for single-target quantification
- Better for very low-level detection (< 0.005% abundance)
Tiny Health Gut Health Tests reports on the microbes and their genetic capabilities in the large intestine. H. pylori is typically located in the gastric, upper-GI region and not commonly picked up in the lower GI. The gold standard for testing for H. pylori is a stool antigen test or a breath test.
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